Development of a new class of proteasome inhibitors with an epoxyketone warhead: Rational hybridization of non-peptidic belactosin derivatives and peptide epoxyketones

Bioorg Med Chem. 2014 Jun 15;22(12):3091-5. doi: 10.1016/j.bmc.2014.04.032. Epub 2014 Apr 24.

Abstract

Proteasome inhibitors are currently a focus of increased attention as anticancer drug candidates. We recently performed systematic structure-activity relationship studies of the peptidic natural product belactosin A and identified non-peptidic derivative 2 as a highly potent proteasome inhibitor. However, the cell growth inhibitory effect of 2 is only moderate, probably due to the biologically unstable β-lactone warhead. Peptide epoxyketones are an important class of proteasome inhibitors exhibit high potency in cellular systems based on the efficient α,β-epoxyketone warhead. Importantly, belactosin derivatives bind primarily to the primed binding site, while peptide epoxyketones bind only to the non-primed binding site of proteasome, suggesting that hybridization of them might lead to the development of a new class of proteasome inhibitors. Thus, we successfully identified a novel chemotype of proteasome inhibitors 3 and 4 by rational structure-based design, which are expected to bind to both the primed and non-primed binding sites of proteasome.

Keywords: Belactosin A; Epoxyketone; Proteasome inhibitor.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antineoplastic Agents / chemical synthesis*
  • Antineoplastic Agents / pharmacology
  • Binding Sites
  • Cell Proliferation / drug effects
  • Drug Design*
  • Epoxy Compounds / chemical synthesis*
  • Epoxy Compounds / pharmacology
  • HCT116 Cells
  • Humans
  • Intercellular Signaling Peptides and Proteins
  • Ketones / chemistry*
  • Models, Molecular
  • Peptide Fragments / chemical synthesis*
  • Peptide Fragments / pharmacology
  • Peptides / chemistry*
  • Proteasome Endopeptidase Complex / chemistry*
  • Proteasome Inhibitors / chemical synthesis*
  • Proteasome Inhibitors / pharmacology
  • Structure-Activity Relationship

Substances

  • Antineoplastic Agents
  • Epoxy Compounds
  • Intercellular Signaling Peptides and Proteins
  • Ketones
  • Peptide Fragments
  • Peptides
  • Proteasome Inhibitors
  • belactosin A
  • Proteasome Endopeptidase Complex